PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71488.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 437aa MW: 48434.2 Da PI: 7.8441

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00048	337	374	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +r+ ++++ L +l+ + +K + a++L++A+ YI+ L PON71488.1 337 RKERLGERIAALHRLVAPF-----GKTDTASVLTEAIGYIQFL 374 6678888999999999998.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEYRNLHSQN QQQDQVIGRS SLPIGPQSGT ARITSTRNNW NPSMNFLNHG TTLYPTDESI 60 PNSRLWPLSP ATTFTTQDLM MSYSSSSSST ATDHARGFNQ RISAHNESSW APNIKKEPPD 120 IDFDKLSINN ISSTPYPELD ESNYLISTMY KQNQHNIIGL SNSSTVSSGQ ISADDQDFYS 180 GNAQSNNNDV NASFGARFTA TNGYDDDLGH VFPIRTTSST STSLLSSPSL MASGGFNLQA 240 LNLLMSSSHS SYNNHNLSLY SQSSSTSFGH GHHDMQEYSR SSPSNSSNMT SAFLNEVTRS 300 TKRPSSSAFS EPKEYSRAES KKSKSMLRTS NPPLKVRKER LGERIAALHR LVAPFGKTDT 360 ASVLTEAIGY IQFLHDQVQT LSMPYMKSLQ TKSSRKMQQV HGWSKEEETD QLNRMDLRSR 420 GLCLVPQSCA SYVNGFD

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEYRNLHSQN QQQDQVIGRS SLPIGPQSGT ARITSTRNNW NPSMNFLNHG TTLYPTDESI  60
PNSRLWPLSP ATTFTTQDLM MSYSSSSSST ATDHARGFNQ RISAHNESSW APNIKKEPPD  120
IDFDKLSINN ISSTPYPELD ESNYLISTMY KQNQHNIIGL SNSSTVSSGQ ISADDQDFYS  180
GNAQSNNNDV NASFGARFTA TNGYDDDLGH VFPIRTTSST STSLLSSPSL MASGGFNLQA  240
LNLLMSSSHS SYNNHNLSLY SQSSSTSFGH GHHDMQEYSR SSPSNSSNMT SAFLNEVTRS  300
TKRPSSSAFS EPKEYSRAES KKSKSMLRTS NPPLKVRKER LGERIAALHR LVAPFGKTDT  360
ASVLTEAIGY IQFLHDQVQT LSMPYMKSLQ TKSSRKMQQV HGWSKEEETD QLNRMDLRSR  420
GLCLVPQSCA SYVNGFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-36	bHLH family protein