PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71743.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Nin-like

Protein Properties

Length: 418aa MW: 47464.5 Da PI: 4.4877

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	76.8	2.4e-24	323	373	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l dl++y +l+i+dAAk ++vc+TvLK+iCR+++++RWP+Rki+s+ PON71743.1 323 TGKLTLMDLREYLHLTIEDAAKAMNVCPTVLKKICRRHNLPRWPYRKIRSI 373 5689*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MADPGAIMSY SDLYDGPFSE NLSNILTDYE NPSLLDLPEP DHIGGQGPSN TSDNHNPNHV 60 TLEQNSATIW DLPIDFNVDQ CLGSGPNNQP GPSRIRDHQE TSNNDPDDQA IEENLELPQV 120 NNSNNVGGNS RTLPTWPSPP VPFNCTCCQV LREIIHVNEF NNYMKLEIHG RLGMICHVIW 180 ESRSSTNNNV TTSTSSGNDP QFEMFDFCRQ SIEDVKRFLV EYCSRRKVEG YVMLHDPLSI 240 FYEALCVGLE WDELSNNDFD FVPTSPPHNS GGAEENYTEQ QGQEEQQVTH QQEQTVETRP 300 ETTQIIDVER NSRISLAEQR QRTGKLTLMD LREYLHLTIE DAAKAMNVCP TVLKKICRRH 360 NLPRWPYRKI RSIKRQISSL RPNLESNDAA VREQAQAEID RLRQEATNIC AGVDVVEL

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MADPGAIMSY SDLYDGPFSE NLSNILTDYE NPSLLDLPEP DHIGGQGPSN TSDNHNPNHV  60
TLEQNSATIW DLPIDFNVDQ CLGSGPNNQP GPSRIRDHQE TSNNDPDDQA IEENLELPQV  120
NNSNNVGGNS RTLPTWPSPP VPFNCTCCQV LREIIHVNEF NNYMKLEIHG RLGMICHVIW  180
ESRSSTNNNV TTSTSSGNDP QFEMFDFCRQ SIEDVKRFLV EYCSRRKVEG YVMLHDPLSI  240
FYEALCVGLE WDELSNNDFD FVPTSPPHNS GGAEENYTEQ QGQEEQQVTH QQEQTVETRP  300
ETTQIIDVER NSRISLAEQR QRTGKLTLMD LREYLHLTIE DAAKAMNVCP TVLKKICRRH  360
NLPRWPYRKI RSIKRQISSL RPNLESNDAA VREQAQAEID RLRQEATNIC AGVDVVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-13	Nin-like family protein