PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71785.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 250aa MW: 28637.7 Da PI: 9.9445

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.9	6.5e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgkly+y+s PON71785.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYDYCS 59 8***********************************************96 PP
2	K-box	86.7	4.6e-29	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e++ L++e++ Lq+ qR+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R+kK+++l+++i+el +k + +++en +L kk PON71785.1 81 NPASEVKFWQREATTLRQELQYLQECQRQLMGEELSGLSIKDLQNLENQLEMSLKGVRTKKDQILTDEIKELNRKGNLIHQENIELYKKA 170 4678899*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYDYCSS 60 SMKAVIERYN KVKEEHHQLL NPASEVKFWQ REATTLRQEL QYLQECQRQL MGEELSGLSI 120 KDLQNLENQL EMSLKGVRTK KDQILTDEIK ELNRKGNLIH QENIELYKKA DLMRKENVEL 180 QRKAYGASNA NEANRSTSLG YTISNGYDAQ TPIHLQLSQP QPQPQPQQPQ SQPQKNKTSP 240 KATMLGLQLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14210.1	1e-99	MIKC_MADS family protein