PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON71820.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 373aa    MW: 40914.4 Da    PI: 4.5111
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON71820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA39.39e-13193229135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  PON71820.1 193 CQHCGISEncTPAMRRGPCGPRSLCNACGLMWANKGT 229
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MDLVNPRPLQ ARPYIDEEDR VAQIPVQFEG DGVGFGSLNG GVGVAGRDSS MAATRNSGLP  60
SRTSELTVAF EGEVYVFPAV TPEKVQAVLL LLGGCDVPSC VPSSEFLIEQ NSGGMSDPSR  120
SSKLSRRIAS LVRFREKRKD RCFEKKIRYS CRKEVAQRMH RKNGQFASSK EPCKLDVGNW  180
DSSDGTPGVE SVCQHCGISE NCTPAMRRGP CGPRSLCNAC GLMWANKGTL RDLTKSGRAN  240
TSDQNETEIL VNVKPLSVEP ENFYHEQDEQ GSPEEIKPVS LDSELPSLRL SDQEMQDDHV  300
SVQVENSSVE FDEQNGTSFW EGIIVSCVTY SRTCGSQETL DEFTNASGTE FDIPEHFDDQ  360
ISVFSSLTSS IGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-61GATA family protein