PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72518.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 489aa    MW: 55476.2 Da    PI: 4.5494
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS240.85.7e-741244842373
        GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                  +lLl+ Aeav++++   a++++arl+ l  + ++g +++  la +ft++L+++  +  +e+ ++ p       ++ ++++a+++ +e+sP++kf+h+t
  PON72518.1 124 ADLLLTGAEAVEAKNWPVASNIIARLNSLllNEKNGdNSFSSLALFFTQGLHHKSIK-APEMLHQQPDF-----KQRNTVSAFQIIQELSPYVKFAHFT 216
                 679************************99876777768***************9998.55555433333.....355788999**************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL.r 195
                 aNqaIlea++g + vH+iDfdi++G+QWp+L+  La+R++   slR+T++   +++++  +e+tg+rL++fA++++++f f+ +     e ++ e++ +
  PON72518.1 217 ANQAILEATHGGRDVHVIDFDIMEGIQWPPLMVDLAKRNDA--SLRVTAIIW-DQQNAVFMERTGRRLKEFADSINLSFVFDQV-----EIVSAEDFdK 307
                 **************************************766..9******99.5578999**********************97.....4444444423 PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsl..eaklpreseerikvEre 288
                 ++ g +l+ n++++ ++++++s sl +   ++L  + +lsPk++v+ve+e    ++  s sF e f+ea+++y+++ dsl  +++ +++   r+ +E+e
  PON72518.1 308 LQAGQTLIANCMIHQFHMPSRSFSLVK---SFLVGMTKLSPKILVLVEEElfnlSKIPSMSFIEFFCEAFHHYTSFADSLvlSSSGGNKMGLRRLIEKE 403
                 477*******************99999...********************8665555788********************744554555599******* PP

        GRAS 289 llgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +lg ++ + + +   e++er+     W++ l +   Fkp+p+s+ + +qak l++ ++  g+ v++e+  l l+Wk+ pL+++S W
  PON72518.1 404 ILGTRVLDSLRQFPCEKEERML----WEDGLASlKRFKPIPMSYGNISQAKFLVSLFS-GGFWVQHEKCRLNLCWKSTPLTTASIW 484
                 ***************9777766....***9988468**********************.89************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MVLQQIDHQY PSSFNLSYIE EFNQCSFEAF SSFQIDDPLF TSDVIEDGTM AGESMERLLQ  60
IEASLMEIET INEDIDLLAL DTLMEVEFGN YLDQGAEENE PVLTEGSSPS EESQVEFRED  120
SSLADLLLTG AEAVEAKNWP VASNIIARLN SLLLNEKNGD NSFSSLALFF TQGLHHKSIK  180
APEMLHQQPD FKQRNTVSAF QIIQELSPYV KFAHFTANQA ILEATHGGRD VHVIDFDIME  240
GIQWPPLMVD LAKRNDASLR VTAIIWDQQN AVFMERTGRR LKEFADSINL SFVFDQVEIV  300
SAEDFDKLQA GQTLIANCMI HQFHMPSRSF SLVKSFLVGM TKLSPKILVL VEEELFNLSK  360
IPSMSFIEFF CEAFHHYTSF ADSLVLSSSG GNKMGLRRLI EKEILGTRVL DSLRQFPCEK  420
EERMLWEDGL ASLKRFKPIP MSYGNISQAK FLVSLFSGGF WVQHEKCRLN LCWKSTPLTT  480
ASIWVPIRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-49GRAS family protein