PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72528.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NAC
Protein Properties Length: 196aa    MW: 23119.7 Da    PI: 9.8005
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.99.5e-54211491128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+yk+ePwd+++     + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls k
  PON72528.1  21 VPPGFRFHPTEEELVGYYLKRKINALKIDL-DVIIDLDLYKMEPWDIQArcnLGYDEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLS-K 117
                 69****************************.99**************953432233677**************************************.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfykgrap+g+ktdW+mheyr+
  PON72528.1 118 NRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRF 149
                 999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSFIDLSLSQ NNKAMEMESC VPPGFRFHPT EEELVGYYLK RKINALKIDL DVIIDLDLYK  60
MEPWDIQARC NLGYDEQNEW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAVLSKNRI  120
IGMRKTLVFY KGRAPNGRKT DWIMHEYRFQ TTEHAPPQAS YLFHHLYITS FLTTLFEVML  180
RVLSISRPNI VFVKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.18e-73NAC family protein