PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72693.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 204aa    MW: 22612.7 Da    PI: 9.6939
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.62.5e-211057249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 ++++  rqvtfskRr+g++KKA+EL +LC++ev v++fs+ gk y +
  PON72693.1 10 MVKDSNCRQVTFSKRRTGLFKKANELATLCGTEVGVVVFSPGGKPYSF 57
                5788999************************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGRRKIEIKM VKDSNCRQVT FSKRRTGLFK KANELATLCG TEVGVVVFSP GGKPYSFGQP  60
NVESIADRFL NQDQRKTTTT TNASSSSKRR SKSEAAALEK LNQQLNDCMN QLNDEKLRGE  120
ALDKGVADAK GLFLGGNNES KSIQELGKTE LEKLKEALEE LRERVKERAG EMEASSTLLM  180
LSNAIEPPPK LEDDYVKTKV AKNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.14e-36M-type_MADS family protein