PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72717.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 429aa MW: 46995.4 Da PI: 6.7389

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.4e-34	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerFveav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl PON72717.1 31 KPRLKWTPDLHERFVEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 85 79****************************************************8 PP
2	Myb_DNA-binding	66.4	5.3e-21	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ PON72717.1 33 RLKWTPDLHERFVEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 84 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MANIPPERHL FLQATGGNGG DSGLVLSTDA KPRLKWTPDL HERFVEAVNQ LGGADKATPK 60 TVMKLMGIPG LTLYHLKSHL QKYRLSKNLH GQANSPSKIG TVAGPAAEII SEASANHLNN 120 LSINGSQTNK GFQISETLQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ AVLEKAQETL 180 GRQNVGTVVG LEAAKVQLSE LVSKVSTQYL NSTLVELKET PELRPQLNDC SMDSCLTCEG 240 SQKEQEMAAH NSTTNGMVLR AYNNNSATTT AAATTTTSNS FPERKESTTT ASSAEDQLNT 300 QQKTKLKWCN NNNDAKLDPN NMFLISERRM FPVERSGLSM SIGLEGPGKE NDVGSRWDTE 360 GSFVDRNATT IGSSRAAMDS GKVENEKVSQ TSCRVPNYFA AQLDLNAHDH ENDSSSSCKQ 420 FDLNGFSWS

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MANIPPERHL FLQATGGNGG DSGLVLSTDA KPRLKWTPDL HERFVEAVNQ LGGADKATPK  60
TVMKLMGIPG LTLYHLKSHL QKYRLSKNLH GQANSPSKIG TVAGPAAEII SEASANHLNN  120
LSINGSQTNK GFQISETLQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ AVLEKAQETL  180
GRQNVGTVVG LEAAKVQLSE LVSKVSTQYL NSTLVELKET PELRPQLNDC SMDSCLTCEG  240
SQKEQEMAAH NSTTNGMVLR AYNNNSATTT AAATTTTSNS FPERKESTTT ASSAEDQLNT  300
QQKTKLKWCN NNNDAKLDPN NMFLISERRM FPVERSGLSM SIGLEGPGKE NDVGSRWDTE  360
GSFVDRNATT IGSSRAAMDS GKVENEKVSQ TSCRVPNYFA AQLDLNAHDH ENDSSSSCKQ  420
FDLNGFSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-114	G2-like family protein