PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72736.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 204aa    MW: 22833.1 Da    PI: 10.0261
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.3e-16139173135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C +  Tp+WR gp g+ktLCnaCG++y++ +l
  PON72736.1 139 CNHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRL 173
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MDFCWNVSIS PPSSDLNGSS SGLDDLFSSQ NTKPQKRPTS LEAFSVPSKA RSKRKRALLT  60
KKRDPLTIWS SHQTLQMAMT SDPPLLQQTY WLADSELIVP KNEEEREEKK GSVEEKEPLG  120
ELGLMGHGLL QPGPVARRCN HCLSQRTPQW RAGPLGPKTL CNACGVRYKS GRLLPEYRPA  180
KSPTFVSYLH SNSHKKVMEM RNGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.14e-36GATA family protein