PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72837.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 182aa MW: 20144.9 Da PI: 8.6101

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00062	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H PON72837.1 43 FECKTCNRRFSSFQALGGHRASH 65 89**********99999998887 PP
2	zf-C2H2	13.9	0.00016	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg +Fs L H+r+H PON72837.1 96 HECTICGVVFSMGQALGGHMRRH 118 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MREDHDDGNS NINMAKCLML LSHQPNKPIY YEPMKPSSAA DVFECKTCNR RFSSFQALGG 60 HRASHKKPKV VAANDGDHDH GDEEPCNKKS PVNKRHECTI CGVVFSMGQA LGGHMRRHRA 120 AVDDGGFSSL LPVQVNPVLQ LKRSSSIKAG GSWLDLNLTP LENDLKLLFG KMAPRVDSNF 180 IY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	2e-42	C2H2 family protein