PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72915.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 153aa    MW: 17285.7 Da    PI: 4.8212
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3438.3e-1436125198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f  +l +s+v+  +rlvlp k +    + +   + + + + +g++W++ +  +++ +    + + W+ F+++n+Lk gD +vF+l+++s++   + vfr
  PON72915.1  36 FTVILAKSHVHPINRLVLPAKIL---PLLPSLVVPV-VLTNRGKKWDMFY--DGTNDNnKRFDSSWRTFANENNLKIGDACVFELEESSTR---ILVFR 125
                 6778899999999******9999...4444343345.5566*********..4444333579**********************9875444...44444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MEEQMSNEGS NVSSTSNNEE ELLDEEFWPL SGKPFFTVIL AKSHVHPINR LVLPAKILPL  60
LPSLVVPVVL TNRGKKWDMF YDGTNDNNKR FDSSWRTFAN ENNLKIGDAC VFELEESSTR  120
ILVFRVQILR GDIPSELLPR IIGESSASPI VIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-07B3 family protein