PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON73079.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 390aa    MW: 43320.3 Da    PI: 6.7634
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON73079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.33.3e-33239296259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  PON73079.1 239 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSIVITTYEGQHNHH 296
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MSNDQERSDQ HHHHDPYRPY DPFSYEIDGR ACSLFPFLNH NSSIMYNHST AVLAQQNVQS  60
AEAAAATNNS TTSSLDPTMN SYLMSYTDCL QGSMDQYNNL SRAFDISCAA SSSDIVSQIV  120
DHSNHDIDST TTNNNNLVTN YPMKAGAADQ SAGTSENPST PNSSISASSS NEAAAGGVED  180
SGKSKKEDDD VKQPKGSDDQ DGDEDKASKK VSSKTKKKEK RPREPRFAFL TKSEIDHLED  240
GYRWRKYGQK AVKNSPYPRS YYRCTTQKCT VKKRVERSFQ DPSIVITTYE GQHNHHCPAT  300
LRGNAAAMLS PSLLASAASV GTPNLHHEFF TQLLPINNTN HHLHYSNHPG EPSSILYSNL  360
THQYRQQLQV PDFGLLQDLV PAFSRHKQDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-49WRKY family protein