PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73539.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 198aa MW: 22623.1 Da PI: 6.7874

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.6	1.2e-19	9	63	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le F++++ p ++++LA +lgL+ rqV +WFqNrRa+ + PON73539.1 9 KSKKRFSDEQIKSLEVIFRSDSRPESLTKQQLAGELGLQPRQVAIWFQNRRARSR 63 67889************************************************98 PP
2	HD-ZIP_I/II	109.1	3.1e-35	10	101	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+r+s+eq+k+LE F+++++ e+ K++la eLglqprqva+WFqnrRAR +tkq+E++y++Lk++y++l+++ e+L++e+++L+ +l+e PON73539.1 10 SKKRFSDEQIKSLEVIFRSDSRPESLTKQQLAGELGLQPRQVAIWFQNRRARSRTKQIETEYSKLKASYNTLVSSVESLKRENQALNIQLQE 101 69*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MNTMTRGEKS KKRFSDEQIK SLEVIFRSDS RPESLTKQQL AGELGLQPRQ VAIWFQNRRA 60 RSRTKQIETE YSKLKASYNT LVSSVESLKR ENQALNIQLQ EAKTVLPKDQ GSGSLESDQT 120 GNGRENPFES KDVRSQNLLQ SCKREVEVHH ENVGKEAEFL HLALSTDGSL TSSVDWRGFE 180 SGCYVDESSC SPWWEFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-40	HD-ZIP family protein