PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73777.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 226aa MW: 25699.1 Da PI: 9.2306

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1.1e-18	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd++l+d ++ +G g+W++Iar+ g++R++k+c++rw +yl PON73777.1 9 RGLWTAEEDKILLDHIRVHGRGNWNRIARETGLKRCGKSCRLRWMNYL 56 788*******************************************97 PP
2	Myb_DNA-binding	58.3	1.7e-18	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +++eE++l+++++k+lG++ W++Ia +++ gRt++q+k++w++ PON73777.1 62 RGHFSEEEEDLIIRLHKLLGNR-WSLIAGRVP-GRTDNQVKNHWNTC 106 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MKAESENKRG LWTAEEDKIL LDHIRVHGRG NWNRIARETG LKRCGKSCRL RWMNYLSPNV 60 KRGHFSEEEE DLIIRLHKLL GNRWSLIAGR VPGRTDNQVK NHWNTCLSKK LGIKKGKSKV 120 VGIKNVTQSL SRELDKKVCT PLGSYLSELP NKCNNTSEAQ GNEVTKDGSQ SPPGFMTGQR 180 EVEMSDNYDS SFLFSSITDD FINPTSFYFM EPPDEPSVGF VWNSGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-61	MYB family protein