PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73805.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

LBD

Protein Properties

Length: 157aa MW: 17876.3 Da PI: 7.3376

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.4	6.6e-40	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC+++pyfp+++p++fa+vh++FGasnv k+l++lp++ r +a++s+ +eA++r++ PvyG+vg+i++l+q++++++++la++++ PON73805.1 5 RCAACKYLRRSCPSDCIFSPYFPSNDPQRFACVHRIFGASNVGKMLQRLPPDLRAEAADSMHFEAKCRIEFPVYGCVGIISQLHQEIQNVETQLAKTRA 103 6**********************************************************************************************9998 PP DUF260 100 e 100 e PON73805.1 104 E 104 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MISGRCAACK YLRRSCPSDC IFSPYFPSND PQRFACVHRI FGASNVGKML QRLPPDLRAE 60 AADSMHFEAK CRIEFPVYGC VGIISQLHQE IQNVETQLAK TRAEIALITS SNNTIQEAQL 120 RDDQYYSSLN NNFMQPQHTN IIGQYDQMAF NNSSWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	2e-53	LBD family protein