PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74093.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YC
Protein Properties Length: 271aa    MW: 30005 Da    PI: 4.6846
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.92e-083584398
       NF-YC 43 aPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                +P l+ska elf+ +l  r++  + +   +t++   ++++v   ++fdfl div +
  PON74093.1  3 VPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCVHTFNVFDFLKDIVSK 58
                89***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAVPLLVSKA LELFLQDLCD RTYEITLKRG AKTMNSLHLK QCVHTFNVFD FLKDIVSKVP  60
DLGGSDTAGE DRSVAKRRKV NDGEDNASDE ESKRSKLHEA GNHSAGSGRG RGRGRGRPRG  120
RGSRVMERET AAHQDKFEDD PDISKYNEND DHNLETLDDR AEPEGPKVNV AGDKNAEGPI  180
RNFDLNVDLN ENGDLTTQST PAPVPTPTPN PPPPPAGLSG KTIPEMKHEE YPYPHPGWSL  240
ADVEKMAIDP IQLANLNRRM DEDDEDYDEE G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109119RGRGRGRGRPR
2111121RGRGRGRGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19490.15e-44NF-YC family protein