PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74124.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 173aa    MW: 19302.7 Da    PI: 4.3764
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.91.3e-181050242
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                +ienk  r v+fskR ng++KKA+ELS L++a++a++++s+
  PON74124.1 10 KIENKEHRLVSFSKRWNGLFKKAHELSSLTGAQIAILVLSE 50
                79*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVKRRIDIQK IENKEHRLVS FSKRWNGLFK KAHELSSLTG AQIAILVLSE FSRPYFHASP  60
PSFITQLLNP EFSVGASTSS SSSPELAVES SSWLRYLLDF EVEGCEEVDE LVAAKEKLEE  120
MREKAAMALD LNFANSLLST SGDLDDDDSL PSNVDDSMLH DWIGLFEGCI SSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51860.22e-14MIKC_MADS family protein