PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74318.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 253aa    MW: 28910 Da    PI: 9.0616
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.43.9e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  PON74318.1  9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59
                79***********************************************96 PP
2K-box73.84.8e-258217111100
       K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 e+++++ ++e++ Lk+e+  Lq++q +l+G+dL+ LslkeL +LeqqL+++l +++++K++ll+eq+e+++ +e+++  en++Lr+++ee
  PON74318.1  82 EKTEKQDSKEVDVLKDEVARLQKKQLRLMGKDLNGLSLKELYHLEQQLNEGLMSVKERKERLLKEQLEQSRLQEQRATLENETLRRQIEE 171
                 55677899*******************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKRTLSRYN KCVDYPDGAI VEKTEKQDSK EVDVLKDEVA RLQKKQLRLM GKDLNGLSLK  120
ELYHLEQQLN EGLMSVKERK ERLLKEQLEQ SRLQEQRATL ENETLRRQIE ELRCLFPRTE  180
CIVPSYLEYY PIEKKNSSAN QSVIGPDQAS NYAAEKGDSD TTLHLGLPTD VYRKRKAPEK  240
EMHSNDSGSN IGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.14e-75MIKC_MADS family protein