PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74376.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 466aa    MW: 52461.3 Da    PI: 5.6823
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.33.8e-139464631374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v++g+le+a+  L+++s+l spdgd+mqR++ayfteALa r+++s+++ly+a+++++    ++see+ +++lf+e++P+lk+s++++N
  PON74376.1  46 LIQLLVACANHVAAGSLENANIGLEHISHLTSPDGDSMQRIVAYFTEALADRMLKSWPGLYRAFNSTKIV--SVSEEILVQRLFFELCPFLKLSYVITN 142
                 689*************************************************************998887..6************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege+++HiiD++ sq++Q + Llq+L++Rpegpp+lRiTg+++    ++e le+++ rL++ Ae+l++pf+fn+ ++++le+l++e+Lrvk+
  PON74376.1 143 QAIFEAMEGEKMIHIIDLNSSQPAQMIDLLQTLSARPEGPPHLRITGIHE----QREVLEQMALRLTEEAEKLDIPFQFNP-IVSKLENLDIESLRVKT 236
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll..................................................desvsleserdevLklvkslsPkvvvvveqead 247
                 gEalaV++vlqlh+ll                                                    s+s + +  ++L+++++lsPkv+vv+eqe++
  PON74376.1 237 GEALAVSSVLQLHSLLatdeeiygrnspsvashleklslmnqrplkdwlakeshslfnmspdsalsPLSLSASPKMGSFLSAIWGLSPKVMVVTEQESN 335
                 *************************************************************99977333444446777********************* PP

        GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
                  n+ ++ler++eal +y alfd+le++++r+s er+k+E++l+g+ei+n++acegaer+erhe+l kW  rle aGF+ vpls++ ++qa +llr+ + 
  PON74376.1 336 NNGYTLLERISEALFFYGALFDCLESTVSRTSVERQKIEKMLFGEEIKNIIACEGAERTERHEKLDKWILRLELAGFGRVPLSYQGMMQATRLLRQSPa 434
                 *************************************************************************************************** PP

        GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + gy+++ee+g+l+++W+drpL+svSaWr
  PON74376.1 435 FSGYKIKEENGCLIMCWQDRPLFSVSAWR 463
                 ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MIKDEGSSSV TSPSLQFFPL MPTSTSSGSP SPWLREPRSE ERGLYLIQLL VACANHVAAG  60
SLENANIGLE HISHLTSPDG DSMQRIVAYF TEALADRMLK SWPGLYRAFN STKIVSVSEE  120
ILVQRLFFEL CPFLKLSYVI TNQAIFEAME GEKMIHIIDL NSSQPAQMID LLQTLSARPE  180
GPPHLRITGI HEQREVLEQM ALRLTEEAEK LDIPFQFNPI VSKLENLDIE SLRVKTGEAL  240
AVSSVLQLHS LLATDEEIYG RNSPSVASHL EKLSLMNQRP LKDWLAKESH SLFNMSPDSA  300
LSPLSLSASP KMGSFLSAIW GLSPKVMVVT EQESNNNGYT LLERISEALF FYGALFDCLE  360
STVSRTSVER QKIEKMLFGE EIKNIIACEG AERTERHEKL DKWILRLELA GFGRVPLSYQ  420
GMMQATRLLR QSPAFSGYKI KEENGCLIMC WQDRPLFSVS AWRFRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein