PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74495.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 587aa    MW: 65559.6 Da    PI: 4.8539
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.11.4e-1372185872374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cA ++s+g+  +a+ ++++l++++s +g+p qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++aN 
  PON74495.1 218 RQLLIDCAGVLSEGNIDEASIMINELRQMVSVQGEPSQRIAAYMVEGLAARMAASGKFLYKALKCKEPP---SSDRLAAMQILFEVCPCFKFGFMAANG 313
                 799*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI ea++ e+rvHiiDfdi+qG Q+++L++++as++++pp+lR+Tgv++pes+  s   l+ +g+ L+++A+e gvpfef++ va+r++ +++++L+++
  PON74495.1 314 AIIEAFKDEKRVHIIDFDINQGSQYMTLIRTIASKTSKPPHLRLTGVDDPESVqrSVGGLKIIGQMLEQLAAEHGVPFEFQA-VASRTSLVTPSMLDCR 411
                 ***************************************************9989999************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 pgEal+Vn+++qlh+++desvs+ ++rd++L++vkslsPk+v+vveq++++n+++F+ rf+ea +yysa+f+sl+a+lpres++r++vEr++l+r+ivn
  PON74495.1 412 PGEALIVNFAFQLHHMPDESVSTINQRDQLLRMVKSLSPKLVTVVEQDVNTNTSPFFPRFIEAYNYYSAVFESLDATLPRESQDRTNVERQCLARDIVN 510
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +vaceg+er+er e ++kWr+r+++aGF++ p+s++++++++ l+r++ ++ y++++e g+l +gW+d++L+++SaWr
  PON74495.1 511 IVACEGEERIERYEVAGKWRARMTMAGFTSCPMSSNVVNSIRELIRQYCDR-YKIKHEMGALHFGWEDKSLIVASAWR 587
                 *************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MSLVRPAEVS ATSYRNPKLY SLKGSNDSSG FSTQTFGSDK RKTLYVTDSY STESYEKYFL  60
DSPSDEIQQP SCSSISGNSF NPQDASSYQL RAGSVSHLAT QNPCNASFML MRDHVSHQSN  120
FESDYLESSS PDLGEFDEST MRLKLQELER ALLNDNDDED DEDMFGSGQS MEVDGEWVGP  180
ARNGLIHDSP KESSSSDSYP SSISSNKEIS QISPRTTRQL LIDCAGVLSE GNIDEASIMI  240
NELRQMVSVQ GEPSQRIAAY MVEGLAARMA ASGKFLYKAL KCKEPPSSDR LAAMQILFEV  300
CPCFKFGFMA ANGAIIEAFK DEKRVHIIDF DINQGSQYMT LIRTIASKTS KPPHLRLTGV  360
DDPESVQRSV GGLKIIGQML EQLAAEHGVP FEFQAVASRT SLVTPSMLDC RPGEALIVNF  420
AFQLHHMPDE SVSTINQRDQ LLRMVKSLSP KLVTVVEQDV NTNTSPFFPR FIEAYNYYSA  480
VFESLDATLP RESQDRTNVE RQCLARDIVN IVACEGEERI ERYEVAGKWR ARMTMAGFTS  540
CPMSSNVVNS IRELIRQYCD RYKIKHEMGA LHFGWEDKSL IVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein