PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON74498.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 368aa MW: 41895.1 Da PI: 9.1817

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON74498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	22	67	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++ PON74498.1 22 RGHWRPAEDERLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 67 899***************************.*********996 PP
2	Myb_DNA-binding	60.1	4.9e-19	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ PON74498.1 74 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 117 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEESAGPAGS PGAADDAKTC PRGHWRPAED ERLRQLVEQY GAQNWNSIAE KLQGRSGKSC 60 RLRWFNQLDP RINRRPFTEE EEERLLAAHR IHGNKWALIA RLFPGRTDNA VKNHWHVIMA 120 RKQREQSKVC GKRSYRDHHH HLHLFSDLES EHAASSSGNF PRKQAPLQGR DYSFSLESYN 180 TNKDNRSPTS ILILDEYSPL SSWNFANSLT TTRVNKQTVS SSEAAFVIRS REHLNKDHHH 240 HHHHHRQRDF SSSCSNNFYS TSSASWLYGS SGVPVNYKRV VSSSFGHHHD HDQAVFNKQL 300 RSDHQKKLLA NNNTSSSFCD NALPTRMCGK IRASAILGQE DHDHHESNND AKEGIPFIDF 360 LGVGISSS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEESAGPAGS PGAADDAKTC PRGHWRPAED ERLRQLVEQY GAQNWNSIAE KLQGRSGKSC  60
RLRWFNQLDP RINRRPFTEE EEERLLAAHR IHGNKWALIA RLFPGRTDNA VKNHWHVIMA  120
RKQREQSKVC GKRSYRDHHH HLHLFSDLES EHAASSSGNF PRKQAPLQGR DYSFSLESYN  180
TNKDNRSPTS ILILDEYSPL SSWNFANSLT TTRVNKQTVS SSEAAFVIRS REHLNKDHHH  240
HHHHHRQRDF SSSCSNNFYS TSSASWLYGS SGVPVNYKRV VSSSFGHHHD HDQAVFNKQL  300
RSDHQKKLLA NNNTSSSFCD NALPTRMCGK IRASAILGQE DHDHHESNND AKEGIPFIDF  360
LGVGISSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	5e-62	MYB family protein