PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON74690.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 289aa MW: 32228.8 Da PI: 8.5728

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON74690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.4e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+++G+++W++I+r ++ gR++k+c++rw + PON74690.1 12 KGPWSPEEDESLQSLVQRYGPRNWSLISRSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	54.1	3.7e-17	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+++++a+ + G++ W+tIar ++ gRt++ +k++w++ PON74690.1 66 PFSAEEDDIIIQAHSECGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MESSLRYADK VKGPWSPEED ESLQSLVQRY GPRNWSLISR SIPGRSGKSC RLRWCNQLSP 60 QVKHRPFSAE EDDIIIQAHS ECGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSSEVED 120 GDGADDEPSI RSRKRLASAP PPLTVSDLCY SSGSPSGSEA TDSRASRPVA RTGVVVDQSP 180 SPNDNIHSPN DNNEPSTRLT LSLPGTESFG YYSNQDSDNN NIYRREGGVK RVSSQPEKMS 240 FGPDFMSVMK EMIRKEVRNY MADLEKNCEF SRSDGVRNVG VKRIGITKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	9e-84	MYB family protein