PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74728.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 273aa    MW: 29351.7 Da    PI: 8.6555
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.00012149193655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 n   ++R +++ +++  L+ l+ +      +K + a++L +A+ YI+ Lq
  PON74728.1 149 NVPAKKRKEKLGERITALQHLVSPF-----GKTDTASVLHEAMGYIRFLQ 193
                 556699999*************998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAKSERFDCD NLSVTGGTSF SQLLFADDNV LGLDVNQIFR CNNNNNNNAS LFSAEKTPRM  60
LCFEKFPNRG ERAFSGSTQK SGVTCSDSSS SASSSNNNSV STMSESNRKR NGSNQESVQC  120
ASTVTTTTCI VPNQRTSSKK FKTENPTTNV PAKKRKEKLG ERITALQHLV SPFGKTDTAS  180
VLHEAMGYIR FLQEQVQVLC SPYLQRLPSS LPDKEGGGGG ENGVVGGEGK SKDLRSRGLC  240
LIPVECTVHV ANTNGADLWS PAMASNVSSS TKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-48bHLH family protein