PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74796.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family LBD
Protein Properties Length: 207aa    MW: 22331.3 Da    PI: 8.2996
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260101.57.7e-322103197
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C+l++++     p++q++++ +v+k+FG++ ++++++a+p+++r+++++sl+yeA  r+ +Pv+Gavg++++++++++q+++e+
  PON74796.1   2 SCNGCRVLRKGCSDNCMLRECLqwiesPQAQAHATLFVAKFFGRAGIMSFISAVPQHQRPALFQSLLYEAVGRTVNPVNGAVGLLWTGNWHVCQSAVET 100
                 6***********************************************************************************************998 PP

      DUF260  95 all 97 
                 +l+
  PON74796.1 101 VLR 103
                 876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSCNGCRVLR KGCSDNCMLR ECLQWIESPQ AQAHATLFVA KFFGRAGIMS FISAVPQHQR  60
PALFQSLLYE AVGRTVNPVN GAVGLLWTGN WHVCQSAVET VLRGGALGPL SGAADQTSAD  120
NAGSDIDHLV SRRPKKRPIT NFDDHDAFSP SDLDLCLMAG RRSSSSSTKM VEKIRAATPS  180
EESETTTLAS SSVDSNGARS KLLRLFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-68LBD family protein