PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON74838.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 221aa    MW: 23800.4 Da    PI: 9.804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON74838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.3e-212575256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAaka++aa+++++g+
  PON74838.1 25 HYRGVRKRP-WGRYAAEIRDPTK---KSRVWLGTFDTAEEAAKAYDAAAREFRGA 75
                69*******.**********864...6*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MALKERMGVK KATNNNNNNK SIEMHYRGVR KRPWGRYAAE IRDPTKKSRV WLGTFDTAEE  60
AAKAYDAAAR EFRGAKAKTN FPLPSSAADS RSPSQSSTVE SSGNGNEFPE RDSTRRLGGG  120
GGAVFPFLQQ EAAAAYRGVH AGSFVPTRHP GLFFDALSRG EFVTPVYPVR FDPGTVEFAV  180
GSGGGAQTQS ESDSSSVVEG QPKRVVLDLD LNLAPPGEAY I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-33ERF family protein