PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75393.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 384aa MW: 42470.4 Da PI: 6.4751

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.7	2.5e-14	188	234	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L PON75393.1 188 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 234 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MMSCGKKLED EAECSKTIEN NIQGFQEQFL LHHQIMHHHH QQDHHQITSD HHHHVYNGAG 60 RSALIFPEVS PLLQPTAAWS LPPVHSFNPA HFGPNPVRDV HDPFLVPPPP PPSSSYASLF 120 NRRGGGAPSL QFTYDGTHHH PSSDHLRILS DTIGPVVQPG SAPFGLQAEL GKMTAQEIMD 180 AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH VKELKRQTSL 240 IAETSPVPTE TDELTVDDAS SDEDGRFVIK ASLCCEDRSD LLPDLIKTLK ALRLRTLKAE 300 ITTLGGRVKN VLFITGDEDS CGGADDDDED DDHQDPQSHH HHQFCISSIQ EALKAVIEKK 360 GSEDSSSGSV KRQRTTTNNI NIYP

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MMSCGKKLED EAECSKTIEN NIQGFQEQFL LHHQIMHHHH QQDHHQITSD HHHHVYNGAG  60
RSALIFPEVS PLLQPTAAWS LPPVHSFNPA HFGPNPVRDV HDPFLVPPPP PPSSSYASLF  120
NRRGGGAPSL QFTYDGTHHH PSSDHLRILS DTIGPVVQPG SAPFGLQAEL GKMTAQEIMD  180
AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH VKELKRQTSL  240
IAETSPVPTE TDELTVDDAS SDEDGRFVIK ASLCCEDRSD LLPDLIKTLK ALRLRTLKAE  300
ITTLGGRVKN VLFITGDEDS CGGADDDDED DDHQDPQSHH HHQFCISSIQ EALKAVIEKK  360
GSEDSSSGSV KRQRTTTNNI NIYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	194	199	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	3e-86	bHLH family protein