PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75400.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 453aa MW: 50820.8 Da PI: 6.3722

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	143.9	1.2e-44	119	273	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+skti+WL++++k+ai el ++ ++ + +c+++++ ++ g PON75400.1 119 TGKKDRHSKISTAQGLRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFNKSKAAIRELKDSLTKRS-SCSNNEDDGGGG----Ggddddddddddv 212 79************************************************************44444.552222222222....0222234555666 PP TCP 89 ............kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137 ++ ++ +kk++ ++ ++ +akesr kar+rarertrek++++++++ PON75400.1 213 dedhddeilvgnVDMPGKEIRKKKNVRKLHHCLVAKESRDKARERARERTREKKMLQKSTQ 273 667777889987455555544444444444788999***************99997765 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
NYQNFPLINQ TNMPSKQLEN IDDDHHHHHH HQIPNSNQEY YTHLPTIFED DGVMLSHLLS 60 QKQLSLASAS ITTTATTSHN DDMNITNSSS KVFLKKKQII RGGGGAKTTT VNNSTRRRTG 120 KKDRHSKIST AQGLRDRRMR LSLQIARKFF DLQDMLGFDK ASKTIDWLFN KSKAAIRELK 180 DSLTKRSSCS NNEDDGGGGG GDDDDDDDDD DVDEDHDDEI LVGNVDMPGK EIRKKKNVRK 240 LHHCLVAKES RDKARERARE RTREKKMLQK STQTSQKPQK NMVAGSEVSE NQHHDDVDSV 300 SMCEKFQAES VADYYSSMMM MMSSSGGANS EDDFLGLFPP GNWELINSSS KPHSFGHMNY 360 KPLQISTTNT TSDIYEEKPS SIFHTSTSST DTGEENPSSG FMAAETAAHH HEGENPNPNN 420 DPVFFSTRTS TLISHIQDQD QLAGSNVFHG INF

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

NYQNFPLINQ TNMPSKQLEN IDDDHHHHHH HQIPNSNQEY YTHLPTIFED DGVMLSHLLS  60
QKQLSLASAS ITTTATTSHN DDMNITNSSS KVFLKKKQII RGGGGAKTTT VNNSTRRRTG  120
KKDRHSKIST AQGLRDRRMR LSLQIARKFF DLQDMLGFDK ASKTIDWLFN KSKAAIRELK  180
DSLTKRSSCS NNEDDGGGGG GDDDDDDDDD DVDEDHDDEI LVGNVDMPGK EIRKKKNVRK  240
LHHCLVAKES RDKARERARE RTREKKMLQK STQTSQKPQK NMVAGSEVSE NQHHDDVDSV  300
SMCEKFQAES VADYYSSMMM MMSSSGGANS EDDFLGLFPP GNWELINSSS KPHSFGHMNY  360
KPLQISTTNT TSDIYEEKPS SIFHTSTSST DTGEENPSSG FMAAETAAHH HEGENPNPNN  420
DPVFFSTRTS TLISHIQDQD QLAGSNVFHG INF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-28	TCP family protein