PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75479.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 499aa MW: 54859.6 Da PI: 5.93

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	311	356	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L PON75479.1 311 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 356 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MEDLMISPSS SSSLVSLSHE AAAPPSLQQR LQFIVQSQPD WWAYAIFWQT SSDDSGRLFL 60 TWADGHFQGP KHTASPPTSG AVHAERRKIL KGIQSLIGTE NSMSDITDSG ADVTDAEWFY 120 VMSLTRSFLA GDGVPGKALS SSSLVWLTGG HELQFYNCDR AKEAHFHGIE TLVCIPTSSG 180 VLELGSYEII RENWGLVQQA KSLFGSDPGP IQFLSGNISF ADIGIIAGLQ EEDEQEHNNT 240 KKKETTLDLM KTTTAMTTTK RKKEQGGGTN NYLAESEQSD SDCPLVGDAI KLRAPKKRGR 300 KPGLGRDTPL NHVEAERQRR EKLNHRFYAL RAVVPNVSRM DKASLLSDAV SYINELKAKI 360 DELESQLLVQ QKETNNNWKR VKLEMADNLD NQSTTTSVDQ ARPNNNNSTS SGSAAVVAAG 420 VEVEVKIVGT DAMIRVQSEN VNYPSARLMG ALRELEFHVH HASVSTINEL MLQDVVVKVP 480 DQGMRNDPEA LKAAIVRNL

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MEDLMISPSS SSSLVSLSHE AAAPPSLQQR LQFIVQSQPD WWAYAIFWQT SSDDSGRLFL  60
TWADGHFQGP KHTASPPTSG AVHAERRKIL KGIQSLIGTE NSMSDITDSG ADVTDAEWFY  120
VMSLTRSFLA GDGVPGKALS SSSLVWLTGG HELQFYNCDR AKEAHFHGIE TLVCIPTSSG  180
VLELGSYEII RENWGLVQQA KSLFGSDPGP IQFLSGNISF ADIGIIAGLQ EEDEQEHNNT  240
KKKETTLDLM KTTTAMTTTK RKKEQGGGTN NYLAESEQSD SDCPLVGDAI KLRAPKKRGR  300
KPGLGRDTPL NHVEAERQRR EKLNHRFYAL RAVVPNVSRM DKASLLSDAV SYINELKAKI  360
DELESQLLVQ QKETNNNWKR VKLEMADNLD NQSTTTSVDQ ARPNNNNSTS SGSAAVVAAG  420
VEVEVKIVGT DAMIRVQSEN VNYPSARLMG ALRELEFHVH HASVSTINEL MLQDVVVKVP  480
DQGMRNDPEA LKAAIVRNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	263	KKKETTLDLMKTTTAMTTTKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46830.1	5e-65	bHLH family protein