PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75568.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 642aa    MW: 73975.5 Da    PI: 8.504
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.96.3e-1162716403374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL++cA+av+s d+++a++l+++++++++p+ d +qRla+yf++AL+arla++ + ly+ l +se s    ++ l  ++++  +sP+l++s+  aN++
  PON75568.1 271 TLLTQCAQAVASYDQRNATQLIKQIRQHSTPHEDGTQRLAHYFANALEARLAGTRTALYSPLVSSEMS---AVDILRGHQVYITASPFLRMSYCFANRM 366
                 69*********************************************************999999998...99************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 I + +++++++HiiDf+i++G+QWp L+q L+++p+gpp+lRiTg++ p++g   ++++eet++rLak++++++vp ef++ +++++e++++e+L++++
  PON75568.1 367 IWDLAQNAKTIHIIDFGIQYGFQWPGLIQRLSQKPGGPPKLRITGLEFPQPGfrPSHRVEETKRRLAKYCQRFNVPSEFKM-ITQKWETIRYEDLNINR 464
                 ***************************************************9*9***************************.799************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E+++Vn+ ++l++++de+v ++++rd+vLkl+++++P++++++  +  +n++ F++rf eal +ysalfd++++++pre++ r + E+++ gr+i+nv
  PON75568.1 465 DEVVIVNCLYRLKHIPDETVVMNNPRDTVLKLIRRINPELFIHAVTNGTYNAPFFVTRFREALFHYSALFDMFDNTVPREEQYRLVFEKAIYGRDIENV 563
                 *************************************************************************************************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +aceg er+er e++++W+ r ++aGFk+ pl+ k+ + +k  +r  + + + ve + ++l++gWk+r+L+++S+W+
  PON75568.1 564 IACEGLERVERPESYKQWQVRNTRAGFKQTPLDPKTFEAVKNKVRSSYHKDFVVERHGEWLLQGWKGRRLLAISCWK 640
                 ************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    
MDTLLEGFAV RMNSFRFNHS SVSFHSNQSF VREPVNHDGN LEPQPKFHHA SYDSSQSSSP  60
SSGIDSPGYS DSFNATLKFI SEMLMEEEDL ERKALILQDP LALQAAEKSF YDVLGQNYPP  120
CSDIGEFEPK SSCVKASFDN RLVQNSNFGG FRSVAQFRGR TGESSSFFQR GKAQLIDLDR  180
VGFSLPNGHR GKKNHQREYD DGDQEEVLSN KQSAVYGDDF EPTEMLDKVL LYHGDNEQES  240
LRAEKLRLKQ GKGSGRSKRQ DNKTEMVDLW TLLTQCAQAV ASYDQRNATQ LIKQIRQHST  300
PHEDGTQRLA HYFANALEAR LAGTRTALYS PLVSSEMSAV DILRGHQVYI TASPFLRMSY  360
CFANRMIWDL AQNAKTIHII DFGIQYGFQW PGLIQRLSQK PGGPPKLRIT GLEFPQPGFR  420
PSHRVEETKR RLAKYCQRFN VPSEFKMITQ KWETIRYEDL NINRDEVVIV NCLYRLKHIP  480
DETVVMNNPR DTVLKLIRRI NPELFIHAVT NGTYNAPFFV TRFREALFHY SALFDMFDNT  540
VPREEQYRLV FEKAIYGRDI ENVIACEGLE RVERPESYKQ WQVRNTRAGF KQTPLDPKTF  600
EAVKNKVRSS YHKDFVVERH GEWLLQGWKG RRLLAISCWK PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59450.11e-175GRAS family protein