PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75570.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 722aa    MW: 82003.8 Da    PI: 5.6477
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3628.3e-1113517202374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cA+av++ d++  ++lL++++e++s +gd +qRla+yf+++L+ rl+  ++  y+ l ++ +s    ++ l+a++++  ++P+ ++s++ aN+
  PON75570.1 351 TTLLTQCAQAVANYDQRTSTQLLKQIREHSSRHGDENQRLAHYFANGLEVRLSA-GTPSYNPLGSNGAS---AADILKAYQVYLTACPFKRMSNFYANR 445
                 689**************************************************9.77777777666665...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+  e+++r+HiiDf++ +G+QWp+L+q L++Rp+gpp+lR Tg++ p++g   +e++ +tg rLa+++e+++vpfe+n+ +a+++e++++e+L+++
  PON75570.1 446 TILKLSEKATRLHIIDFGVLYGFQWPCLIQRLSERPGGPPRLRFTGIEFPQPGfrPSERVDQTGLRLANYCERFNVPFEYNM-IAQKWETVRVEDLKLD 543
                 ****************************************************9*****************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E ++Vn+  ++++l+de+v  + +rd+vL+l+++++P+v+++   +  hn++ Fl+rf eal ++salfd++ea+lpre+++r + E+e++gr+++n
  PON75570.1 544 RDEFTVVNCLDRMKNLPDETVMEDCPRDAVLRLIRRIEPDVFIHGVMNGTHNAPFFLTRFREALFHFSALFDMFEASLPREDQHRLMFEKEVFGRDVMN 642
                 *********************9999************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vva eg +r+er et+++W+ r ++aGFk+v+l+ + +k ++ +++ ++ + + v+e+  ++++gWk+r   ++S+W+
  PON75570.1 643 VVAGEGVQRVERPETYKQWQVRNTRAGFKQVALDVELVKGVRKMVKCHYHRDFVVDEDGRWMFQGWKGRIFQAISCWQ 720
                 *************************************************999*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MDTLFEDLHG GTMNKFRFEP DSHLVSSNQN LVHDYDEVNH HEFIDPVFLT TNPDLHSEPS  60
PSSGSSSEGD SPESGEFSNN AIILKFINEI LMEEDLEAKP CMLQDCLALQ AAEKSFYDVI  120
GEKYPSSLNQ ILPCLMNKYL KSPHDNFVRS FSNDSSIGSS TSPGNWVDSS QSSDVQTSLV  180
ESPEDALLAP YSYGEARSLW GLGQVQGKAG FFLPNGSGEI FDLEGNLSLP LDSTEQGSTV  240
FGIPERYSSN SSDGSKGKKS HQRESGYDNP EQEGRSNKHS AVFPDFSEPS DIFDEVLLPK  300
PTKKSEFCSL DENNEDKPGQ QWRKEPKGSS SNGKRTRQKK RNSSREVVDL TTLLTQCAQA  360
VANYDQRTST QLLKQIREHS SRHGDENQRL AHYFANGLEV RLSAGTPSYN PLGSNGASAA  420
DILKAYQVYL TACPFKRMSN FYANRTILKL SEKATRLHII DFGVLYGFQW PCLIQRLSER  480
PGGPPRLRFT GIEFPQPGFR PSERVDQTGL RLANYCERFN VPFEYNMIAQ KWETVRVEDL  540
KLDRDEFTVV NCLDRMKNLP DETVMEDCPR DAVLRLIRRI EPDVFIHGVM NGTHNAPFFL  600
TRFREALFHF SALFDMFEAS LPREDQHRLM FEKEVFGRDV MNVVAGEGVQ RVERPETYKQ  660
WQVRNTRAGF KQVALDVELV KGVRKMVKCH YHRDFVVDED GRWMFQGWKG RIFQAISCWQ  720
PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-175GRAS family protein