PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75618.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 182aa    MW: 20324 Da    PI: 5.8666
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000115173123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  PON75618.1 51 YECTFCKRGFSNAQALGGHMNIH 73
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MDSSSEQPSQ ENPDQAIPMI MSESDQDDHN NNDQQSTAPV GGSSSSAARS YECTFCKRGF  60
SNAQALGGHM NIHRKDKAKL KQFVPPFSLI NHETQQQQQQ RSLEIPRMLS SYSSPNPWFV  120
LDKEGTTRDD DQVQGKSSDH AGRNSSSGPS DHHQLDLELR LGRERPDQDS STPSNMATRK  180
FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.12e-17C2H2 family protein