PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76016.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

E2F/DP

Protein Properties

Length: 375aa MW: 42393.8 Da PI: 8.5999

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	68.2	1.1e-21	18	83	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL++l+++flkl+++ g++ l+++a++L v +rRR YD++N+Le ++++++k+kn+++wkg PON76016.1 18 RKEKSLGVLCSNFLKLYNRDGVGAIGLDDAASQL---GV--ERRRMYDVVNILEIVGVVSRKAKNQYTWKG 83 79***************999********.....****************************98 PP
2	E2F_TDP	67.2	2e-21	142	220	2	70
E2F_TDP 2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwk 70 ++ksL lltq+f+kl+ +s+++ + l+++ak L + ++k+RR+YDi+NVL+++nliek + k+++rw PON76016.1 142 RDKSLSLLTQNFIKLFLCSDADLILLDNAAKGLPGDaddatALRTKVRRLYDIANVLSSINLIEKirhpdSGKPAYRWL 220 79*****************************77799999******************99999****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MSSFLSLESE TRPSVYCRKE KSLGVLCSNF LKLYNRDGVG AIGLDDAASQ LGVERRRMYD 60 VVNILEIVGV VSRKAKNQYT WKGLGEIPRT LEQLKEEGLR ENFNSSLCCS RISNDNEHRG 120 LLSLNTGEED HSSVSSKSKN KRDKSLSLLT QNFIKLFLCS DADLILLDNA AKGLPGDADD 180 ATALRTKVRR LYDIANVLSS INLIEKIRHP DSGKPAYRWL CWSGKPKNEI DTSDINDSNE 240 PKKRAFGTDV TNYNFKRKRE VTAVDCKSNQ ETGRQTNTKS TELEQHEYDG EEVKQHPKHA 300 SKGIVFGPFA PVSMSKVGDA ANKKMRQDQN WESLASSYRP QYRNQALCDL FSHYMEAWKS 360 WFVDAVGTQK MQQIC

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MSSFLSLESE TRPSVYCRKE KSLGVLCSNF LKLYNRDGVG AIGLDDAASQ LGVERRRMYD  60
VVNILEIVGV VSRKAKNQYT WKGLGEIPRT LEQLKEEGLR ENFNSSLCCS RISNDNEHRG  120
LLSLNTGEED HSSVSSKSKN KRDKSLSLLT QNFIKLFLCS DADLILLDNA AKGLPGDADD  180
ATALRTKVRR LYDIANVLSS INLIEKIRHP DSGKPAYRWL CWSGKPKNEI DTSDINDSNE  240
PKKRAFGTDV TNYNFKRKRE VTAVDCKSNQ ETGRQTNTKS TELEQHEYDG EEVKQHPKHA  300
SKGIVFGPFA PVSMSKVGDA ANKKMRQDQN WESLASSYRP QYRNQALCDL FSHYMEAWKS  360
WFVDAVGTQK MQQIC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	259	KKRAFGTDVTNYNFKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	1e-111	E2F/DP family protein