PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76543.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 358aa    MW: 40047.6 Da    PI: 5.6566
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.5e-29122183159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK++ g+++pr+Y+rCt++   gC ++k+v+rs++dp+++e+tY+g+H+++
  PON76543.1 122 MEDGYSWRKYGQKDILGANHPRGYFRCTHRkaqGCLATKQVQRSDQDPSLLEVTYKGRHTCS 183
                 58***************************98999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEKKNMDFEQ KTLINELTQG KELAKQLISH LQPSSSKETR DVLVGKILSS YEKALSMLNW  60
VGEPKALESP PSMTSFENTS SPRSVFYDQD SNHRDVFKKR KTMSKWTEKI SVSLGTGPEG  120
PMEDGYSWRK YGQKDILGAN HPRGYFRCTH RKAQGCLATK QVQRSDQDPS LLEVTYKGRH  180
TCSRASQLAM ASASLIKQGF KAEKNQFPHH EEGKEEKPKQ SQSTFFGLGA GFEVKTEDLD  240
TREDDIFQPF SFSSTPIESE NLGNHFFSEM IDTNFAGSFS PSFISPTSSE SAYFSVSPCH  300
NISSFGLANN VKTPESDLNE ILSAPTSVSN SPIGDLDLTL DKVDFESNFP FDSPEFFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-47WRKY family protein