PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76652.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 93aa    MW: 10636.2 Da    PI: 9.0306
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.6e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+ + + +G+g +W + +r+ g++R++k+c++rw++yl
       PON76652.1 14 RGPWSPEEDATLKTYLETHGTGgNWIALPRKAGLRRCGKSCRLRWLNYL 62
                     89**********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDATLKTYLE THGTGGNWIA LPRKAGLRRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDHIIC NLYNQMGSRQ VYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.14e-56MYB family protein