PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76653.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 227aa    MW: 24888.6 Da    PI: 5.7957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.7e-084262346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
       PON76653.1  4 RWSVIASQLP-GRTDNDVKNYWNT 26
                     4*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVVRWSVIAS QLPGRTDNDV KNYWNTKLKK KLLAGKISLI TTNTSSNPIP ASTSTTTDHL  60
ISGSKPSFQP PILVPNLQTL TENSSLSCPN SQTATLRMLS ADINYNVPGL SVYDQRLSFN  120
NSVMDFTDHQ FDHVNSKKNR DIINGSLSQE VLSISHSSNS IAPASDHHTL LPEISGCDEY  180
SDGTTTSMDF GFGLSPYDNI VSDVSFEEKA AYNSMSLADH QSIINHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-14MYB family protein