PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76736.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 324aa    MW: 35828.3 Da    PI: 6.6123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH505.5e-164796255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  PON76736.1 47 RSKHSVTEQRRRSKINERFQILRDLVPHS----DQKRDTASFLLEVIEYVQYLQ 96
                899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MRTPAKGNQE EEEFEEDEFG SKKDGPSSNN NSNSKDARNN DKASAIRSKH SVTEQRRRSK  60
INERFQILRD LVPHSDQKRD TASFLLEVIE YVQYLQEKVQ KYEGSYQGWS SEPTKLIPWR  120
NSHWRVQNYV GHPQTVKNGP GSSFPGKFDE SNISISPNML TSTQNPVESD PSRDVALKVL  180
ERQPEVANKG ISVVGPTRSD GMLTHPLQIP VSDSQSTQCP MTSDGQNQHE ELMVEGGTIS  240
VTSTYSQGLL NSLAQALQNA GLDLSQASIS VQIDLGKRAN RGLSSGTSIS KDHQNPTSSN  300
QTIAHHRDAG IGEDSDQAQK RLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-94bHLH family protein