PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76798.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 873aa    MW: 95782.4 Da    PI: 6.4276
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.73.9e-182583357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PON76798.1 25 KYVRYTAEQVDALERVYAECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                5678*****************************************************97 PP
2START155.35.1e-491663782204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHH....HHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvla....llveellddkeqWdetlakaetlevissg..galqlm 94 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++ g a+ra+g+v  +++    +  +e+l+d+  W +++++ e+   +  g  g+++lm
  PON76798.1 166 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPTkhnsQQIAEILKDRTSWFRDCRSLEVFTMLPAGngGTIELM 264
                 7899*************************************************99887333457899999999****************9999****** PP

                 EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHH CS
       START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksgl 189
                 + +++a+++l+p Rdf+++Ry+  l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l++s+ 
  PON76798.1 265 YIQTYAPTTLAPaRDFWTLRYTTNLENGSLVVCERSLSGSGAGPNsaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSK 363
                 **************************************998888889999************************************************* PP

                 HHHHHHHHHHTXXXX CS
       START 190 aegaktwvatlqrqc 204
                 + ++k++ a+l++ +
  PON76798.1 364 VVAQKITIAALRYIR 378
                 **********99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 873 aa     Download sequence    
MAMAVAQHRE SSSGSSINKH LDNGKYVRYT AEQVDALERV YAECPKPSSM RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLSAM NKLLMEENDR LQKQVSQLVC  120
ENGFMRQQLH TVSASAATTD ASCDSVVTTP QHSLRDANNP AGLLSIAEET LAEFLSKATG  180
TAVDWVQMPG MKPGPDSVGI FAISQSCGGV AARACGLVSL EPTKHNSQQI AEILKDRTSW  240
FRDCRSLEVF TMLPAGNGGT IELMYIQTYA PTTLAPARDF WTLRYTTNLE NGSLVVCERS  300
LSGSGAGPNS AAAAQFVRAE MLPSGYLIRP CEGGGSIIHI VDHLNLEAWS VPEVLRPLYE  360
SSKVVAQKIT IAALRYIRQI AQETSGEVVY SLGRQPAVLR TFSQRLIRGF NDAVNGFNDD  420
GWSIVNVDSA EDVTIAVNSA KNLSTIASPA NSLAFLGGVL CAKASMLLQN VPPAVLVRFL  480
REHRSEWADF NVDGYTAAAL KPGSYAYPGM RPTRFTGSQI IMPLGHTIEH EELLEVVRLE  540
GHSLAQEDAF LSRDIHLLQI CSGVDDNAVG ACSELVFAPI DEMFPDDAPL LPSGFRIIPL  600
ETKTVESRCF HPLKDMYMLS ESKDGLPAHR TLDLTSSLEV GSATTLASGD LSLSHNVRSL  660
LTIAFQFPFE SNLQDNVATM ARQYVRSVIS SVQRVAMAIS PSGLNPGVGP RLSQGSPEAL  720
TLANWICQSY RQVLLAFYYM GSELVRSDSL GGGDSMLKNL WHHQDAILCC SLKTLPVFIF  780
ANQAGLDMLE TTLVALQDIT LDKIFDESGR KALFTDFAKL MQEGFACFPA GICMSTMGRH  840
VSFDQAVAWK VHASEQINTV HCLAFSFVNW SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein