PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76886.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 233aa MW: 26017.2 Da PI: 4.8359

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.9e-21	91	151	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ PON76886.1 91 RQRWSPTTLQLQILERIFEEgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 151 89***************99************************************97 PP
2	Wus_type_Homeobox	99.6	2.4e-32	90	153	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RW+Pt+ Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq PON76886.1 90 ARQRWSPTTLQLQILERIFEEGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 153 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MEKENPQKEG VVGAGAGAGA GVAAAGLYVK VMTDEQMELL RRQISVYTTI CEKLAEMHKA 60 ISARHDLSGM KLGALHCDPI MAYAGHKITA RQRWSPTTLQ LQILERIFEE GNGTPSKQKI 120 KEITSELSQH GQISETNVYN WFQNRRARSK RKQSVPAPNN MEPEAEAETE FLKDSTKPED 180 IESEDIEFYD NSAPRDHDVY FLSPEELISW SANGSVMELQ SVQSWGGFDV GEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	153	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-67	WOX family protein