PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76947.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CPP

Protein Properties

Length: 964aa MW: 105300 Da PI: 6.0881

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.2	2.2e-15	536	574	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC+kskClk+YC+Cfaag +Cs++C C+dC+Nk+e PON76947.1 536 CKRCNCRKSKCLKLYCDCFAAGIYCSDSCACQDCFNKSE 574 89**********************************987 PP
2	TCR	50	5.8e-16	622	660	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+C+N PON76947.1 622 RHKRGCNCKKSMCLKKYCECYQAHVGCSSGCRCEGCQNI 660 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MDSPETAQVT ISTTTSAIDS PPVQDSPFFN YASNLSPIKP VKTTHVAQIS GFSSPPIVFK 60 SPRTKQHSET NVLKRSQCLQ SSFTEASQNV DRGNKCIVDS GQSTTLCQQG LIIETQKDEV 120 DEFFETHPCS SSGCINEFLA DLEDEDCENS YSATPSLKHS NDALGSSQSP SNNSKETTLK 180 FGDKNGMGAD AGTELEVLLV SLEQAKKDIQ GEPKSDAEPI KIEEEKNDSE WPSNECPNIR 240 IGVHVGHASK KHECLDSLAQ SIESGCQTDA DGTSKPLPLP SQIAQTYKDH SEDVGAVSDG 300 IVENIVRQGY KAFENFGVRR RCLQYEEAHL NTIGDSDSSL NLANTVDSLE LSSSATELET 360 SELCHVDSKA TSSEQHIVNL PQSTATLLHP RYCDKLSVLS KPLGIGLHLN SIVNASPMNY 420 TATASKKSAD QNVGPQGMSS SMTDYNLLEN TKSCSMSVTT VKQVSACDGE TNVIKALIVA 480 SSAISELPPI VQEHYAAPDD NRKSNSQNAD SLEEHDPPSP RKKRKKTANS VGFEGCKRCN 540 CRKSKCLKLY CDCFAAGIYC SDSCACQDCF NKSEYEDTIR ETREQIESRN PLAFAPKIVQ 600 RIPKLPPNNG EDGNQSTPSS ARHKRGCNCK KSMCLKKYCE CYQAHVGCSS GCRCEGCQNI 660 FGKKEEYVAM EHGVSREMVS NRACKELLES PSEPDIEETN RDSLCTELFN PHYLTPVTPS 720 FRHSDHGKHA PKSRLLSIRN LSSPDDLSIL PSNEKSTKSS PRDLEESHIL LETSELLNEC 780 SHDWQADYDT GAVGSVSSRC DVVSHMRDLT QLSDTPPISM ISSTLFRRKD NRNVPQNQLS 840 HGIDRLSSSG TLQWHGSPLT PMTKLSGTKS HQGHDLDSGS GHNDILENEM PVKISSPNKK 900 RVSPPRGHSH VRELGSGSLG GLRSGRKFIL KSVPSFPPLT PCTDSKGSTG TQTTYKLEEN 960 SDKK

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MDSPETAQVT ISTTTSAIDS PPVQDSPFFN YASNLSPIKP VKTTHVAQIS GFSSPPIVFK  60
SPRTKQHSET NVLKRSQCLQ SSFTEASQNV DRGNKCIVDS GQSTTLCQQG LIIETQKDEV  120
DEFFETHPCS SSGCINEFLA DLEDEDCENS YSATPSLKHS NDALGSSQSP SNNSKETTLK  180
FGDKNGMGAD AGTELEVLLV SLEQAKKDIQ GEPKSDAEPI KIEEEKNDSE WPSNECPNIR  240
IGVHVGHASK KHECLDSLAQ SIESGCQTDA DGTSKPLPLP SQIAQTYKDH SEDVGAVSDG  300
IVENIVRQGY KAFENFGVRR RCLQYEEAHL NTIGDSDSSL NLANTVDSLE LSSSATELET  360
SELCHVDSKA TSSEQHIVNL PQSTATLLHP RYCDKLSVLS KPLGIGLHLN SIVNASPMNY  420
TATASKKSAD QNVGPQGMSS SMTDYNLLEN TKSCSMSVTT VKQVSACDGE TNVIKALIVA  480
SSAISELPPI VQEHYAAPDD NRKSNSQNAD SLEEHDPPSP RKKRKKTANS VGFEGCKRCN  540
CRKSKCLKLY CDCFAAGIYC SDSCACQDCF NKSEYEDTIR ETREQIESRN PLAFAPKIVQ  600
RIPKLPPNNG EDGNQSTPSS ARHKRGCNCK KSMCLKKYCE CYQAHVGCSS GCRCEGCQNI  660
FGKKEEYVAM EHGVSREMVS NRACKELLES PSEPDIEETN RDSLCTELFN PHYLTPVTPS  720
FRHSDHGKHA PKSRLLSIRN LSSPDDLSIL PSNEKSTKSS PRDLEESHIL LETSELLNEC  780
SHDWQADYDT GAVGSVSSRC DVVSHMRDLT QLSDTPPISM ISSTLFRRKD NRNVPQNQLS  840
HGIDRLSSSG TLQWHGSPLT PMTKLSGTKS HQGHDLDSGS GHNDILENEM PVKISSPNKK  900
RVSPPRGHSH VRELGSGSLG GLRSGRKFIL KSVPSFPPLT PCTDSKGSTG TQTTYKLEEN  960
SDKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	522	526	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-58	CPP family protein