PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76959.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HB-other
Protein Properties Length: 121aa    MW: 13961.1 Da    PI: 10.0359
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.36.4e-0954102654
                 S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 +++k  +++Le ++++++ p+ +++  + + ++L+ +++  WF  +Ra 
  PON76959.1  54 RLKKLDIQTLEYVYKRTKRPTNTMIDSIVHVTNLPRKRIVKWFEEKRAE 102
                 5678889****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MMAATLPDDE PTSPIITVAE TKTIETVVEK TPEVDTSAKV PVHVMQQRFS TQKRLKKLDI  60
QTLEYVYKRT KRPTNTMIDS IVHVTNLPRK RIVKWFEEKR AEEGVPGQRL PYQRSVPDTV  120
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.13e-34HB-other family protein