PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77372.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 274aa MW: 30914.5 Da PI: 6.6252

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l ++k +G g+W+ +++ g++R++k+c++rw++yl PON77372.1 14 RGAWTALEDKILTAYIKAHGEGQWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	26.9	1.1e-08	67	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ ++ gRt++++k++w++ PON77372.1 67 RGNISHDEEELIIRLHKLLGNR--------LP-GRTDNEIKNYWNTT 104 78999*************99.........************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRSPCCSKE GLNRGAWTAL EDKILTAYIK AHGEGQWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SHDEEELIIR LHKLLGNRLP GRTDNEIKNY WNTTLGKKIA KSEPSSPSQE 120 NKSTLAEQTA KTRGLSDSAA AADHRSKVIR TRASRCTRVV IPNPVTLSVP IENTPATAVP 180 PLCHVDHHHH FTNQSPKNSD VDEEVYYSEV HDQVHYYQGT DHDHDHEVET VTTGIFGNGD 240 ILNDWPVVPS INFLEDDDAI FDLDSLLLDS DEWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	4e-56	MYB family protein