PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77373.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 293aa MW: 33779.4 Da PI: 6.0886

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.9e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l +++k +G g W+ +++ g++R++k+c++rw++yl PON77373.1 14 KGAWTALEDQILTQYIKTHGEGKWRNLPKEAGLKRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.2	6.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++ PON77373.1 67 RGNISEEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 7899****************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGRSPCCSKE GVNKGAWTAL EDQILTQYIK THGEGKWRNL PKEAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SEEEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLEKKVKAIE 120 RQQVEENDTK HRLTTRASSN TPTTAIRTKA TKCTNKILVI RSNTHDPQPN RPVVVQEDHH 180 DHVDIEPSTF QNLANYDNFV ANSSNFELDF DVGELLLDQS ANLSDSEFWK HPCNDIHYLD 240 NNNGVDDYHD HHEEGIDTNK NIDGLNNNWS SSSTCQPFLF SDEILEEWIS RND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	4e-63	MYB family protein