PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON78241.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family G2-like
Protein Properties Length: 320aa    MW: 34736.2 Da    PI: 7.1011
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON78241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.53.1e-3352106155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kprlrWt++LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  PON78241.1  52 KPRLRWTTDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 106
                 79****************************************************8 PP
2Myb_DNA-binding67.13.1e-2154105148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWTt+++e++vdav+qlGg    t+k+I+rtm+ kg+tl ++ks++qky+
       PON78241.1  54 RLRWTTDLHERFVDAVTQLGGAskaTPKAIMRTMNvKGLTLFHLKSHLQKYR 105
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MFPRMIQTHE GIMGQDDVQI QGQGLVGSNH GLGGHNQNLR GDPCLVLTSD PKPRLRWTTD  60
LHERFVDAVT QLGGASKATP KAIMRTMNVK GLTLFHLKSH LQKYRLGIQS GKDMGEASKD  120
ASYLIDSPRA GNSSPNLPTS DINEGYEVKE ALRAQMEVQS KLHLQVEAEK HLQIRQNAER  180
RYIAMLERAC KMLADQFIGG SVVGTDSQKY QGLGSKTHIS HSVDPLGFYS TQSAEGARGQ  240
IQEEVPNSLC PLRADCSTES CLTSHESPGG LTLEGSPGGG KKSILSLDST ASLIWSETKV  300
RTQEVNVASV DPLQITGYGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.13e-66G2-like family protein