PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON78837.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 402aa MW: 45184.9 Da PI: 8.3683

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON78837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.8	1.6e-47	18	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF+Ptdeel+++yLk+k+eg++ ++ evi+e++i ++ePwdLp k+v +e+ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s +++ PON78837.1 18 MFPGFRFSPTDEELISFYLKNKMEGSEKSV-EVIPEIEIWRYEPWDLPaKSVIPSESEWFFFSPRGRKYPNGSQSRRATELGYWKATGKERNVKS-GST 114 579**********************999.99***********556656889**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvf+ grapkge+t+W+mhey + PON78837.1 115 FIGTKRTLVFHIGRAPKGERTEWIMHEYCV 144 **************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MAGASSREAQ LSIAASSMFP GFRFSPTDEE LISFYLKNKM EGSEKSVEVI PEIEIWRYEP 60 WDLPAKSVIP SESEWFFFSP RGRKYPNGSQ SRRATELGYW KATGKERNVK SGSTFIGTKR 120 TLVFHIGRAP KGERTEWIMH EYCVLDKSQD FMVVCRLRKN SEFRLNDSTN RASSGQRPLS 180 ITPNSNCAIS EAGTDQADKV VEFCSKKCSS SYDSYSIEQI DSTSESNQKL TSEVTQPECS 240 GHQKDDVDED DFYAEILKDD IIKLDETSIS AALDIRPLSA ITPENVQKSQ EPVQSTVSQV 300 IPFQGTANRR IRLRKVVART GRGRAIETST SNDYFTGKTT SRQNSEQSPK CTISVSTSRI 360 TVSPHLILVL LLLTFTALFV TLGGFCRVRR IIYNSLYPGF LR

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MAGASSREAQ LSIAASSMFP GFRFSPTDEE LISFYLKNKM EGSEKSVEVI PEIEIWRYEP  60
WDLPAKSVIP SESEWFFFSP RGRKYPNGSQ SRRATELGYW KATGKERNVK SGSTFIGTKR  120
TLVFHIGRAP KGERTEWIMH EYCVLDKSQD FMVVCRLRKN SEFRLNDSTN RASSGQRPLS  180
ITPNSNCAIS EAGTDQADKV VEFCSKKCSS SYDSYSIEQI DSTSESNQKL TSEVTQPECS  240
GHQKDDVDED DFYAEILKDD IIKLDETSIS AALDIRPLSA ITPENVQKSQ EPVQSTVSQV  300
IPFQGTANRR IRLRKVVART GRGRAIETST SNDYFTGKTT SRQNSEQSPK CTISVSTSRI  360
TVSPHLILVL LLLTFTALFV TLGGFCRVRR IIYNSLYPGF LR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	315	RRIRLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	5e-94	NAC family protein