PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79121.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WOX

Protein Properties

Length: 411aa MW: 46695.9 Da PI: 7.8508

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.1	5.4e-22	102	161	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ PON79121.1 102 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 161 7***************99************************************97 PP
2	Wus_type_Homeobox	114.8	4.1e-37	101	163	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ PON79121.1 101 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 163 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MWMMGYNEGG ELNLHDPFNA TARKLRPLIP RPLQPSANTS SQNNTNPSPP CLSRNSHDFF 60 AQYHHLASTN VGHHQNHHND YHQNMMMGKR ELNIGQQVVV SSRWNPTPEQ LRALEELYRR 120 GTRTPSAEQI QHITAQLRRY GKIEGKNVFY WFQNHKARER QKRRRQIMES SPADDLEMSD 180 IQKNNTNKET SLGACRTGFG FEVEQTKNWA PSTNCSSTSL AEESHVSIQR AAKAAVGAES 240 CRTDGWTQFG EGELQHRRNL MERNATWQTM QLSCPPPLPA CHVINTPTTV TTTTTITSNG 300 SSCRTASVPM RTMGQRLIKN TTTNQYDLSI FKTTPYREEN GNALINTSDL NRSELDHEES 360 QTLELFPLRS GDYTNEKETE ISVVSAMSYS TSDITTNVTP CHFFEFLPLK N

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MWMMGYNEGG ELNLHDPFNA TARKLRPLIP RPLQPSANTS SQNNTNPSPP CLSRNSHDFF  60
AQYHHLASTN VGHHQNHHND YHQNMMMGKR ELNIGQQVVV SSRWNPTPEQ LRALEELYRR  120
GTRTPSAEQI QHITAQLRRY GKIEGKNVFY WFQNHKARER QKRRRQIMES SPADDLEMSD  180
IQKNNTNKET SLGACRTGFG FEVEQTKNWA PSTNCSSTSL AEESHVSIQR AAKAAVGAES  240
CRTDGWTQFG EGELQHRRNL MERNATWQTM QLSCPPPLPA CHVINTPTTV TTTTTITSNG  300
SSCRTASVPM RTMGQRLIKN TTTNQYDLSI FKTTPYREEN GNALINTSDL NRSELDHEES  360
QTLELFPLRS GDYTNEKETE ISVVSAMSYS TSDITTNVTP CHFFEFLPLK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	7e-57	WOX family protein