PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79308.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 228aa    MW: 25811.9 Da    PI: 10.6336
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92.1e-14130216195
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 f+  ++ps+v+   +l l  +f++++  +k ++  +tl de+g++++  +  rk +    l++GWk+F+ a++L +gD ++F+l++ s f  +v 
  PON79308.1 130 FIRSMLPSHVTGGFWLGLNVRFCKTNL-PK-RDEVMTLIDEDGNEYKTIYLARKPG----LSGGWKGFAVAHELVDGDALIFQLIRPSAF--KVF 216
                 778899*****************9884.33.5568***************444444....9************************98888..444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVMAKPKVSY EESRRKRLEE NKQRMEALNL PKLAQALQNS SPSKPSPIKS VKKPRTIEKQ  60
VVVVRRSSRV ANKPAPVYKE IVIERLVIPR GISKHRDLSN RVYASDEART NAIERAEKLL  120
SGLESDYPTF IRSMLPSHVT GGFWLGLNVR FCKTNLPKRD EVMTLIDEDG NEYKTIYLAR  180
KPGLSGGWKG FAVAHELVDG DALIFQLIRP SAFKVFIIRV NSPEQGNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-71B3 family protein