PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79325.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 232aa    MW: 25278.8 Da    PI: 9.795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-134693254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +++h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++v+ +k+L
  PON79325.1 46 CKSHKEAERRRRQRINAHLSTLRSLLPNT-----TKTDKASLLAEVVHRVKEL 93
                689*************************9.....8************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MREKEEPMRL ALESESSKRT TSSVVVNLMD GGDSVLSSGS KSAETCKSHK EAERRRRQRI  60
NAHLSTLRSL LPNTTKTDKA SLLAEVVHRV KELREKVADV ARQDGGLWCG FGTGSGPESW  120
PFPGESDEAS LSYCDGEPKL VKAIVCCEDR PGLSRDMARA IGSVRVRPIR AEIMTVGERT  180
KSVVVMQYVG GGSGGEEDIR ALRRALKAVV ENRASGFGLG QMVSGNKRAR IY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.16e-30bHLH family protein