PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79465.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 456aa MW: 50322.5 Da PI: 6.6284

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.1e-10	262	309	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PON79465.1 262 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 309 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MNRALPEMLH CLTAPGNIAG NCSDLTILER QRARLKWQPE QLQRQQQQES SYFSGSELSG 60 VFSFQPHHDQ VQSFQLGLHG DSAVNRPVKP DPGLENGWPV LDKLEMPGFG FESSSSTGLV 120 NGTTLPTTPG FQMNGAISRT YSCPPTVAVA TVTAEVKARE AVVQPEKLSS VAGRESFKKR 180 KNDKLQNSKA VSEDHDSREK RIKGIAEESD SKITQQNSTK NAVTNNRESS SGDTSKENSK 240 ASEVQKPDYI HVRARRGQAT DSHSLAERVR REKISERMKY LQDLVPGCNK ITGKAGMLDE 300 IINYVQSLQR QVEFLSMKLA AVNPRLDFNI DLFAKEMFPA CTAGFQTLGM SAEMSNSAYL 360 QFNPGEQVVS CGGLDMALNS PDMADLRRTI SAPVSIPETF LDASCYTQVQ PPATWDAESQ 420 NLFSLEYNRG RSTTFTCQLP FTGSNSIEAS NLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MNRALPEMLH CLTAPGNIAG NCSDLTILER QRARLKWQPE QLQRQQQQES SYFSGSELSG  60
VFSFQPHHDQ VQSFQLGLHG DSAVNRPVKP DPGLENGWPV LDKLEMPGFG FESSSSTGLV  120
NGTTLPTTPG FQMNGAISRT YSCPPTVAVA TVTAEVKARE AVVQPEKLSS VAGRESFKKR  180
KNDKLQNSKA VSEDHDSREK RIKGIAEESD SKITQQNSTK NAVTNNRESS SGDTSKENSK  240
ASEVQKPDYI HVRARRGQAT DSHSLAERVR REKISERMKY LQDLVPGCNK ITGKAGMLDE  300
IINYVQSLQR QVEFLSMKLA AVNPRLDFNI DLFAKEMFPA CTAGFQTLGM SAEMSNSAYL  360
QFNPGEQVVS CGGLDMALNS PDMADLRRTI SAPVSIPETF LDASCYTQVQ PPATWDAESQ  420
NLFSLEYNRG RSTTFTCQLP FTGSNSIEAS NLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	5e-64	bHLH family protein