PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79728.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

YABBY

Protein Properties

Length: 182aa MW: 20124.9 Da PI: 10.0961

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	152.7	3.3e-47	14	161	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d s+++Cyv+CnfC+t+lav++P++ l+ +vtv+CGhC++l ++ + q+ +h ++ + + s +++ s+sts ss++ PON79728.1 14 DFSPPSDHLCYVRCNFCSTVLAVALPYKRLLDTVTVKCGHCSNLSFLSTRPPLQTAQFLDH-------------PSSLSGFCSDFSRKGSSSTSSSSST 99 567789***********************************877555555554444444.............2333344444455555555554433 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + PON79728.1 100 -NTSTEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 161 .5666777899999*********************************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MNQLVQDEKV SNMDFSPPSD HLCYVRCNFC STVLAVALPY KRLLDTVTVK CGHCSNLSFL 60 STRPPLQTAQ FLDHPSSLSG FCSDFSRKGS SSTSSSSSTN TSTEPLSPKA PFVVKPPEKK 120 HRLPSAYNRF MKEEIQRIKA ANPEIPHREA FSAAAKNWAR YIPHPPAASA SGSNKRVRKQ 180 VL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-60	YABBY family protein