PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79809.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 566aa MW: 60840.7 Da PI: 5.0767

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7.1e-09	382	430	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq PON79809.1 382 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 430 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDMGEKDKFE LDNKNEDAMN YSPGMSSDWR FDGSNLTNTS MGLVTAGNSM AVGKGDLIGS 60 SACSSASMVD SFVPTLWDHP SNPQNLGFCD MNVQNNASTL NALGIRKGSP ASLRTGIDRA 120 LDMCWNQSGP MLKGSMFLPN MPGMLPQSLS QLPTDSAFIE RAARFSCFNG GNFSDMVNPF 180 AIPESMSIYS RGGGMMQGVQ DVLAGSGLKP VLSGVHSQKG ELNVSEASKD ASLTVEHGAS 240 EGSPSKNERS ENLAKSHDEA KQCVGVSGNE SDEAEFSNGV GRDQEEPSML EGAGGEPSAQ 300 VHSSKKRKRN GQDSDLDQAQ GASQQHGEST KDNTEQHQKG DQNPSTTDNK TTAKHGKQGS 360 QGSDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVTGKAVMLD 420 EIINYVQSLQ RQVEFLSMKL ATVNPRLDFN IEGILAKDML QSRVGSSSSL AFSPDMPMPY 480 PTLQPPQQGL LQAGLSGMGG SSDVLRRAIS SQLMPLAGGY KEPSQLPNVW EDELNNVVQM 540 SFGSRTPPNS QDVDGSMPTG QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDMGEKDKFE LDNKNEDAMN YSPGMSSDWR FDGSNLTNTS MGLVTAGNSM AVGKGDLIGS  60
SACSSASMVD SFVPTLWDHP SNPQNLGFCD MNVQNNASTL NALGIRKGSP ASLRTGIDRA  120
LDMCWNQSGP MLKGSMFLPN MPGMLPQSLS QLPTDSAFIE RAARFSCFNG GNFSDMVNPF  180
AIPESMSIYS RGGGMMQGVQ DVLAGSGLKP VLSGVHSQKG ELNVSEASKD ASLTVEHGAS  240
EGSPSKNERS ENLAKSHDEA KQCVGVSGNE SDEAEFSNGV GRDQEEPSML EGAGGEPSAQ  300
VHSSKKRKRN GQDSDLDQAQ GASQQHGEST KDNTEQHQKG DQNPSTTDNK TTAKHGKQGS  360
QGSDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVTGKAVMLD  420
EIINYVQSLQ RQVEFLSMKL ATVNPRLDFN IEGILAKDML QSRVGSSSSL AFSPDMPMPY  480
PTLQPPQQGL LQAGLSGMGG SSDVLRRAIS SQLMPLAGGY KEPSQLPNVW EDELNNVVQM  540
SFGSRTPPNS QDVDGSMPTG QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-127	bHLH family protein